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B D G M O R T _ 

B

buildCommandLine(FilePath) - Method in class org.biouno.r.R
 

D

DescriptorImpl() - Constructor for class org.biouno.r.R.DescriptorImpl
 
DescriptorImpl() - Constructor for class org.biouno.r.RStep.DescriptorImpl
 

G

getCommand() - Method in class org.biouno.r.RStep
Returns the set R command to execute
getContents() - Method in class org.biouno.r.R
 
getDisplayName() - Method in class org.biouno.r.R.DescriptorImpl
 
getDisplayName() - Method in class org.biouno.r.RStep.DescriptorImpl
 
getFileExtension() - Method in class org.biouno.r.R
 
getFunctionName() - Method in class org.biouno.r.RStep.DescriptorImpl
 

M

Messages - Class in org.biouno.r
Generated localization support class.
Messages() - Constructor for class org.biouno.r.Messages
 

O

org.biouno.r - package org.biouno.r
 

R

R - Class in org.biouno.r
Invokes the Rscript interpreter and executes the R script entered on the Jenkins build configuration.
R(String) - Constructor for class org.biouno.r.R
 
R.DescriptorImpl - Class in org.biouno.r
 
R_DisplayName() - Static method in class org.biouno.r.Messages
Key R.DisplayName: Execute R script.
R_FileCreationError() - Static method in class org.biouno.r.Messages
Key R.FileCreationError: Could not create R script temporary file..
R_FunctionName() - Static method in class org.biouno.r.Messages
Key R.FunctionName: r.
R_NullCommandError() - Static method in class org.biouno.r.Messages
Key R.NullCommandError: R command can not be null..
RStep - Class in org.biouno.r
Step for workflow/pipeline compatibility.
RStep(String) - Constructor for class org.biouno.r.RStep
 
RStep.DescriptorImpl - Class in org.biouno.r
 

T

task() - Method in class org.biouno.r.RStep
 

_

_R_DisplayName() - Static method in class org.biouno.r.Messages
Key R.DisplayName: Execute R script.
_R_FileCreationError() - Static method in class org.biouno.r.Messages
Key R.FileCreationError: Could not create R script temporary file..
_R_FunctionName() - Static method in class org.biouno.r.Messages
Key R.FunctionName: r.
_R_NullCommandError() - Static method in class org.biouno.r.Messages
Key R.NullCommandError: R command can not be null..
B D G M O R T _ 
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